WormBase Tree Display for Variation: WBVar02123645

WBVar02123645 Name: Public_name: WBVar02123645
    Other_name: cewivar00854568
    HGVSg: CHROMOSOME_I:g.8458007_8468006del
  Sequence_details: SMap: S_parent: Sequence: D1081
    Flanking_sequences: CCTCTTTTAGTTTTCTCCATTTGCTCAAAA AGTTATCAAATTTTCATGTTTACATGTTCG
    Mapping_target: D1081
    Source_location: 225 CHROMOSOME_I 8458001 8468000 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00199211
      WBGene00006844
      WBGene00199998
      WBGene00171005
      WBGene00304981
      WBGene00201589
      WBGene00008381
    Transcript: D1081.19a.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2-9/10
        Exon_number: 1-11/11
      D1081.16 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      D1081.15 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      D1081.13
      D1081.19b.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2/3
        Exon_number: 1-4/4
      D1081.3.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 6/6
        Exon_number: 7/7
      D1081.2.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2-4/5
        Exon_number: 1-6/6
      D1081.17 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Remark: The boundaries of this variant have been identified only approximately
    This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
  Method: WGS_Flibotte