WormBase Tree Display for Variation: WBVar02122146
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WBVar02122146 | Name | Public_name | WBVar02122146 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00853069 | |||||||
Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_IV | ||||
Flanking_sequences | GGGGCTTAATCTGATACTGTACATGATGTG | AATGACACCTGCCGTTCATTGGTTTTTGTGGTTTTTTTGTGTCTTCTCGGTGATGCTCAATGTTTGAGTTATGGCTTTAGTTCATCTCATCCAACAAAAAGATCGGAAACGAGAATAAGAACATTTTGGGGCAACCTTCCGCTAATCCCCTAGTCGTCTATTAAAAGGGCAAGTGGTGTCAAAAGTCGCAAGAAATATAGAAATTGGTGTCCGTTCTCTTGATGGAAATGAAATTAAACGATTCCCTCGTTAGAAACTCACTTTGTGAAACTGCAAAGATGGAGAGAAGAAGCACAAGGCAAAGGCCACTCATTCGAATCCGGAGGGCATATGTGTGTGGGGGAGAGTTTTTCTGAAAAAAAAAACAGTGAGAAAGGTTTAATGGAGAAGCGTTTAGCACGAAAAAGTGAGCAAATATTAGTTTTTTACTCCTTCATTTATTGAGGATATCGATGAAATAATGAAACAGTTGAGCACACAGGGGGGGAAGGGATTTTGAAATTGAGATATTGAAAAATGCAAAAAAATTGAAAAATGCATGTTAAATTTTAATGTATTAATGTACCTGCCTATCTGCCTACTGCCTACATTTTTTGTAATTTTTCAGATATACGCATAGTGCGCGGTAACGAGGTACGAGGTAAGAGTAGGTTGCCTTTAAGGTGAGCAGGCAGGCAGGAAAATGTGTGCCCGAATTTCTGAAATCTATTATATTTTTTGATAGCTCATATCTTGCATATTTGAAATTATCAAAAAAATTTACAGTTGGTAAAATGTAGAAAAATCTTGAACCTACATTTTAGCAATTTAATATTTTTTGATAAAATCAAAAGTAGCTGAGATATCAACTGGCAAAGTGGAGCTGTAACGGTGCAAAACTATTTGGAAAAATACGAAGAATGTCTTTTCATATATTGGTTTTAAAAAAAGTAAAAAAAAAATTAAATAAAAAAAATAAGCGAGATTTTTGAATAGTTTAGTAGTCAACTAATTTGAAAAAAACCTTTGCAAATATCAAGTTTTAAAAAAGTTCAAAGCATTTGCATTCTACAAGTCGAAAAATGATGTAATAATTCTTCGAGCAATCGAGAGAAAAAATCACATTGAAAAATCACATTTTTTCGAGCAAGAAAAAAAATAAACGATTTACGAAGAAATCATCAAAATGGAGATACGGGGCGTCGGAAAAGGAAAACTGGTGGAGGGAAAAGCAATTCGTAATTCATCATCTGAACGTCTCAATAGTGGCAAAACAATAACAATTGGATGCAATTACGGGCGGTGCATTGCTTTTGAGATCGAACCTTTCCGAATAGGAAAAGCTCGTTGGCGGGTAAATGAACAAAGGATCGTCTGGGGTTGGTGTGGTCGGGAGAGGAAGAAAGTTGAGATTTCCTGTACTTATTCATAAGATATTTAAAATGACATAATTGCAGAGCTCGATGAGGTACGTTAAATTATTATTTCTTATTTTATGTATACCAAATATTGTGTAAATGAGGAAAAAAGGCTACGGTTTTGTACGTAACTAATTTAGGCTTGCCTCTCGCCCATTTTCCAAATTTTAATGTGGGCTTTTGTTAGAGAAAAAAAAAATAGATTTACGCAAGACCACCACTCTAAGAACATGCAGGCACTTTTGCACTTGTGCCTGCAATGGAAATTATTTGAATGTAAGTTATAGAAGCAACAAGTAACAGGGTAGTAAATAACAGATTTTATGTGTAATTTTGCAAAAGTTGTGAGCCAGGCGTAGGTCGCCTTGAAGGCAGGTAGGCATACATTTTTGTGGCCCACGGAGAATGGCTTACAATTTAAAACAACAACTTTTTGAAAAGTTAGCTCTTAGAAAAAAAAGTCATTGAAAATGTGGTTGACTTATAATTAGAAGAACTTGAAATTTTCTAGATTTTTTGAAGACCAGTTCTCAATTTTTAAACTTTAAAAATCTTCGCTAAAATATTTTTTAAAAATATAAAAAAGACTACGCACACAATTTGAATGAAAGTAGAAAACCATGCTCCTAAAAAATTTCGATACAAATTTTATTCAAACAAAACGGGAGAAGAGTGCTGAAAATTGCAATAGTTAGAAAAAATGTTTTTTATATTCCTATTATGATTTTTATGTGTTTTATGGGCTAATGTTCAAAAACCTAAAATTTGAGAAAACGCTCGAACTTTTCGAGGAAGAAAACACATGAAACCTAGAAAGAAATAAAACAGCTATCCTAAAAAATTTGATTGTGTAAAGAGTATTGTGATAGTGGAGAGATTAGAAGAACAGAAGTTACAAATTGTTTTCTTGGTGCACACGGGGTGTGTCTTCAAAGAGGTCACTCTCTCTCTCTCTCTTGGTGAAGAAGAACACACCCACTTCCTCTCTCCTGAGCCCCACCCCCTTTCTTCCCGTCTGTTTTGTGTGCATCTGGTGCACTATTTTGTTCGGCTCTCTGCCACCACAATACCCGCGCGGGTGATGTATGTATAGATTGCAAAAAGCTTCTGTGTTGGTTGTTATTGTACTAGAACAATGAGCTTGTTGGCTTTTGCCCACGCGGATTATGTCAAGTACTGTCGGCACATGGAACTGAGAGCATCCTCCTGAAGAGAGTATGTAAAAGGGCAAGTATGCTAATGGTGTGTGAGAATACGTGAGAGAGGAAAAGGCAAAAAGAAGAAGAAGGAGAAGAAGATGCTAATGCAACAAGAAGTTTTGCGCAAAGAAAGAAAGAATTTCTTTACTTTTGAAAGGGATGAACATCTCAGGAAGTAGGGTGGCAAAGAGATGCCAAAAGGATGTACAACAGAGAAGTTGCACAGGAATTTCAGGAAAACTAGATTTTTAGTTCGTATTATTTCCACATAGAACATTTGAAATGAGAACTAATTTGGTCTTAAAATCGAAATTCGTGACCAGCTTGCAAACGTACAAGGCAAACTTCCATGGTATGCAATCACGCTTAATTGCCTACATACCTGCCTACTAGATACCTATTTTCGGCTTATGCACAGTATAGATTCAGGGATTTCACGTTTCAATTGGCTTGTTGAAAGTTCAGCTCACAATAAGACCTTCAGAAAGTCTCACATGATCTTTGGCAATAGGCACGCTTGTAGGCACGAGGCATGCAGGTATTGTGTCTAGGCTCAATGTGATGTAGAAAAATACATTTCAACGTTAGAATATGTTTGAATTATGGCTTAAAGTTCGATATTTCACGTTTTCCCAAAATAACTGGTCACAGAGAACATGGTACAGTAGAAAATAAAAATTTTGGGTATTTCCAAAAGATATATTCATTAACACAATTCTAACAGTAAAGCTGCCAAACTTTCAATTTCAGGATTAAGGTACAATATAGAAACCGAAAAAAATTATATTCAATGCTATAAAAAATTCGTTTCAAAATTAGATACAAAAACAATTTTCAGTCGACATTTGCAGCCAGCTTTTCTGGCTTTTTTACTTTTTTTTTCAGAAATATATATATTTCTAACACATATTTCATATATTTGCCTCGTTTCTGAAATTTTTTATGTGCCCGATGGGATTTTTGATTGGTGGTGGTTTTTGGAAAAAAAAGGAAAACTAAAAAGTGAAGCGGAAACGATTTGTTTTTTTTTTGCTTTGGAATGGGAATATCAAGTTTTTTTTGGGAAAATGTTCAGAAAAAATCAAAATAGAAAATTATACTTCAACAATCAAAAGAAAAATGTAATTTTTTTGTTGGTTTCCTTCTTAATGAAATTTGACACTTTCTTGAGGCGTGTGTCTTTCTGGGTGGTAAATGCAGGGTCCTCAAATCTTTTTTTTCGCAGTTAAATATTTTGAACTGCAGATTTCAGTTATACTTCTATCAGCAAGCCTTTTATGCAAAAGCAAAAATGCCTGGTGTCGTAAAAAAATTGGGTTCTTAGATTTTTCGAGTTTTCGGCGTATATCAGAGCAAACGGAGAAAAAAAACATGTAAAAATATGACGATTCAAACGAGAAAAAAAAGAAAACCTTTTTTTAACATAGAAACTGTCGAAAACTATTTTTAATTGTTGAAAAGTTGAATGATTGAAAAATTACGGTTTTTTCAAAAATCTAAAACAAAAAATTGTCTAAACATTTTTTTAAATAAAAAAATTCACTTTTCTCCCACAAAATTCGGAACACGAAAACTTTCAATTTTTAGAAAATCTAAAAACGCAAATTGTCCGTTTTTTGATATTCAGAAGGAACGCGTTGGATAGTTCTTAATTAGAAGATAAAAGGTAGTAAAACCCTTATTTCCATAAAACCCTTATTTCCACCACATTCCAGTCAACATTTGTTTTGGTTCCGTGAGTCAAACTAATTAGTTTTGAAATGAAATATTTATGAGTGTTTAGCGCCGTTGTTGAACTGAACGGGCGAATACGGGAAACGAAACAAAACTTGTACGAAAAGCTCGAAAAGAAGAAGAAACGGAAAAAAGTTTGAGAACTTTTTCGAGGAAAAAAGAAGACGAAAATAGATATAGAGCCAAGCAGAGTCCAATTTTAAAAATGAAATTATTAAATTTCGGCCACTTTGTTATAGGTTTCCTCCACAAAAGGATAGATACACTTAACTTTGTTCCCGGAAAACGTAAAAGAGTTGCCTAAAAATAGGAAGAAAAAAATGATAGAAGGAGCAAAAAAGATTTGGTGTAGCAAGGAAAAAAAGATTGAACAAGAGAATGGACAAGATGGAAAAATGGAGAGAATGAAGAAAATTGAGAGATATAGTAGAGAGGATTGAAGAGACTCAGGAAGAGAAAGACGATGGATAAATAAAAAAAGAAATGGGACAAAAAATTGAGTAATGAGCAATTGGACATGAATTTGTGTAATGAAATGTATCCGAGAAAAAAGGAAGGAGAAGGACTTGTGTGTAGAAGAATGATCATGTGAAAAAGCTAAATATTCATGTAATGGGTGGTCTAGAGAAGAAAATAATGAAGGAGTTGTAAGGTTTGAGTAATGATGGCACATTTGATTGAGGCTTCTATTCAAGGGTTTCAATGGGTTCAAGGTTTCCAAACATGGAGATGCTCGATGTATTGCTTACATTAAAAATTAACAGCAATAC | ||||||
Mapping_target | CHROMOSOME_IV | |||||||
Source_location | 225 | CHROMOSOME_IV | 12161001 | 12178000 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Tandem_duplication | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00174089 | ||||||
WBGene00003772 | ||||||||
WBGene00198058 | ||||||||
WBGene00200468 | ||||||||
WBGene00007091 | ||||||||
WBGene00008967 | ||||||||
Transcript | F20B10.1.1 | |||||||
F20B10.8 | ||||||||
F20B10.4 | ||||||||
F20B10.9 | ||||||||
B0001.6.2 | ||||||||
F20B10.3.1 | ||||||||
B0001.6.1 | ||||||||
Remark | The boundaries of this variant have been identified only approximately | |||||||
This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous | ||||||||
Method | WGS_Flibotte |