WormBase Tree Display for Variation: WBVar02114827
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WBVar02114827 | Name | Public_name | WBVar02114827 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00845527 | |||||||
C34H4.3a.1:c.1065_1066insACTTCAAGCGTTGCAACAAATCCACCAAATCCGCAAACCACCCCACCAGTAATCACTACTACTAAATTGGCTTCTAACTTG | ||||||||
CE27820:p.Ile373_Thr374insThrThrThrLysLeuAlaSerAsnLeuThrSerSerValAlaThrAsnProProAsnProGlnThrThrProProValIle | ||||||||
HGVSg | CHROMOSOME_IV:g.1552801_1552802insACTTCAAGCGTTGCAACAAATCCACCAAATCCGCAAACCACCCCACCAGTAATCACTACTACTAAATTGGCTTCTAACTTG | |||||||
Sequence_details | SMap | S_parent | Sequence | C34H4 | ||||
Flanking_sequences | ACATTTTCAGCCGGAGATCTACTACCAGTT | ACTTCAAGCGTTGCAACAAATCCACCAAAT | ||||||
Mapping_target | C34H4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 1552800 | 1552801 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | ACTTCAAGCGTTGCAACAAATCCACCAAATCCGCAAACCACCCCACCAGTAATCACTACTACTAAATTGGCTTCTAACTTG | ||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044073 | ||||||
Transcript | C34H4.3a.1 | VEP_consequence | inframe_insertion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | C34H4.3a.1:c.1065_1066insACTTCAAGCGTTGCAACAAATCCACCAAATCCGCAAACCACCCCACCAGTAATCACTACTACTAAATTGGCTTCTAACTTG | |||||||
HGVSp | CE27820:p.Ile373_Thr374insThrThrThrLysLeuAlaSerAsnLeuThrSerSerValAlaThrAsnProProAsnProGlnThrThrProProValIle | |||||||
cDNA_position | 1134-1135 | |||||||
CDS_position | 1065-1066 | |||||||
Protein_position | 355-356 | |||||||
Exon_number | 9/10 | |||||||
Codon_change | -/ACTTCAAGCGTTGCAACAAATCCACCAAATCCGCAAACCACCCCACCAGTAATCACTACTACTAAATTGGCTTCTAACTTG | |||||||
Amino_acid_change | -/TSSVATNPPNPQTTPPVITTTKLASNL | |||||||
Method | WGS_Flibotte |