WormBase Tree Display for Variation: WBVar02113908
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WBVar02113908 | Name | Public_name | WBVar02113908 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00844581 | |||||||
CE38484:p.Ala57_Asp60delinsSerMetArgAsn | ||||||||
C13D9.9.1:c.169_178delinsTCCATGCGAA | ||||||||
HGVSg | CHROMOSOME_V:g.5000381_5000390delinsTTCGCATGGA | |||||||
Sequence_details | SMap | S_parent | Sequence | C13D9 | ||||
Flanking_sequences | TTATATCTGGATTTTTGATAACTTTTTTAT | TTCAACAATTTGCTGTTGAAATACAACAAC | ||||||
Mapping_target | C13D9 | |||||||
Source_location | 225 | CHROMOSOME_V | 5000366 | 5000375 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTCGCATGGA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00015739 | ||||||
Transcript | C13D9.9.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | C13D9.9.1:c.169_178delinsTCCATGCGAA | |||||||
HGVSp | CE38484:p.Ala57_Asp60delinsSerMetArgAsn | |||||||
cDNA_position | 177-187 | |||||||
CDS_position | 169-179 | |||||||
Protein_position | 57-60 | |||||||
Exon_number | 2/9 | |||||||
Codon_change | GCTTTGCGAGAt/TCCATGCGAAAt | |||||||
Amino_acid_change | ALRD/SMRN | |||||||
Method | WGS_Flibotte |