WormBase Tree Display for Variation: WBVar02110184
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| WBVar02110184 | Name | Public_name | WBVar02110184 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00840723 | |||||||
| Y54G2A.11a.1:c.1210-680_1210-673delinsTTTTTTAAA | ||||||||
| Y54G2A.11b.1:c.-695_-688delinsTTTTTTAAA | ||||||||
| Y54G2A.11b.2:c.-15-680_-15-673delinsTTTTTTAAA | ||||||||
| Y54G2A.11b.3:c.-15-680_-15-673delinsTTTTTTAAA | ||||||||
| HGVSg | CHROMOSOME_IV:g.2767197_2767204delinsTTTAAAAAA | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
| Flanking_sequences | AAATTCAAAATAAACTCTTAAAAAATTTTT | TTGAAAATCTAAAAATAAAATTTGAAATTCCTTCTAAAATTTTAGACAAAAATCTTTTTTTTCAGTTTTACTTATTGAATGTGACTATAATTTACCGTTAGCTTCAATTTAAGTATAATCATGGCTAGGTTTGGTTAATTTTGAAAAAAAATCGGGTCTCGCCACGAGGTTACTGTAGGTACCCTAAATTTTCAAACTTGAGCAAAGTGGGTCATGATTGTACTTAAATTGAAGCTCTCAGTGAGCTAAATTTAAATCTTCAACTGAAATTATGGAGAAATTCAGAATAAAGTCTTGAAAGATTAAAAAAAATTTTGAAAATCTAAAAATAAAATTTGAAATTCCTTCTAAAATTTTAGACAAAAATCTTTTTTTTCAGTTTTACTTATTGAATGTGACTATAATTTACCGTTAGCTTCAATTTAAGTATAATCATGGCT | ||||||
| Mapping_target | Y54G2A | |||||||
| Source_location | 225 | CHROMOSOME_IV | 2767195 | 2767202 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | TTTAAAAAA | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00021876 | ||||||
| Transcript | Y54G2A.11b.3 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y54G2A.11b.3:c.-15-680_-15-673delinsTTTTTTAAA | |||||||
| Intron_number | 2/5 | |||||||
| Y54G2A.11b.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y54G2A.11b.1:c.-695_-688delinsTTTTTTAAA | |||||||
| cDNA_position | 2227-2234 | |||||||
| Exon_number | 4/7 | |||||||
| Y54G2A.11a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y54G2A.11a.1:c.1210-680_1210-673delinsTTTTTTAAA | |||||||
| Intron_number | 5/7 | |||||||
| Y54G2A.11b.2 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y54G2A.11b.2:c.-15-680_-15-673delinsTTTTTTAAA | |||||||
| Intron_number | 3/6 | |||||||
| Method | WGS_Flibotte |
