WormBase Tree Display for Variation: WBVar02105525
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WBVar02105525 | Name | Public_name | WBVar02105525 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00835904 | |||||||
CE24516:p.SerSerAlaLeu718= | ||||||||
Y60A3A.1.1:c.2154_2161delinsTTCGGCGT | ||||||||
HGVSg | CHROMOSOME_V:g.19997473_19997480delinsACGCCGAA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | ||||
Flanking_sequences | GATTTGCCACGTTAGTCTGAGCCAAGAGCA | GAGAGCATGTGCAGAGCTCTGACGTACACC | ||||||
Mapping_target | Y60A3A | |||||||
Source_location | 225 | CHROMOSOME_V | 19997442 | 19997449 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | ACGCCGAA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006786 | ||||||
Transcript | Y60A3A.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y60A3A.1.1:c.2154_2161delinsTTCGGCGT | |||||||
HGVSp | CE24516:p.SerSerAlaLeu718= | |||||||
cDNA_position | 2219-2227 | |||||||
CDS_position | 2154-2162 | |||||||
Protein_position | 718-721 | |||||||
Exon_number | 8/11 | |||||||
Codon_change | tcCTCAGCACTg/tcTTCGGCGTTg | |||||||
Amino_acid_change | SSAL | |||||||
Method | WGS_Flibotte |