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WormBase Tree Display for Variation: WBVar02104389

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Name Class

WBVar02104389NamePublic_nameWBVar02104389
Other_namecewivar00834723
C49G7.10a.1:c.515_540delinsTAAAACTAAAAAATGCCGAAAACCCT
CE42293:p.Ser172_Lys179delinsLeuLysLeuLysAsnAlaGluAsn
C49G7.10b.1:c.398_423delinsTAAAACTAAAAAATGCCGAAAACCCT
CE51587:p.Ser133_Lys140delinsLeuLysLeuLysAsnAlaGluAsn
HGVSgCHROMOSOME_V:g.4040844_4040869delinsAGGGTTTTCGGCATTTTTTAGTTTTA
Sequence_detailsSMapS_parentSequenceC49G7
Flanking_sequencesGTACGCAACTTTGGCATTCTGATACAGCTCAAGGAGATCGATTTTCAGGTTGAAGACTTT
Mapping_targetC49G7
Source_location225CHROMOSOME_V40408294040854From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionAGGGTTTTCGGCATTTTTTAGTTTTA
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023139From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016788
TranscriptC49G7.10b.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScC49G7.10b.1:c.398_423delinsTAAAACTAAAAAATGCCGAAAACCCT
HGVSpCE51587:p.Ser133_Lys140delinsLeuLysLeuLysAsnAlaGluAsn
cDNA_position398-424
CDS_position398-424
Protein_position133-142
Exon_number2/3
Codon_changetCAAAATCAAAAAGTGCCAAAAAGCCGGag/tTAAAACTAAAAAATGCCGAAAACCCTGag
Amino_acid_changeSKSKSAKKPE/LKLKNAENPE
C49G7.10a.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScC49G7.10a.1:c.515_540delinsTAAAACTAAAAAATGCCGAAAACCCT
HGVSpCE42293:p.Ser172_Lys179delinsLeuLysLeuLysAsnAlaGluAsn
cDNA_position545-571
CDS_position515-541
Protein_position172-181
Exon_number4/6
Codon_changetCAAAATCAAAAAGTGCCAAAAAGCCGGag/tTAAAACTAAAAAATGCCGAAAACCCTGag
Amino_acid_changeSKSKSAKKPE/LKLKNAENPE
MethodWGS_Flibotte