WormBase Tree Display for Variation: WBVar02098411
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WBVar02098411 | Name | Public_name | WBVar02098411 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00828550 | |||||||
R08F11.4.1:c.76_113delinsCTTTTCAAGACAATAGCCGAAATCTCCGGAGAGGGCCA | ||||||||
CE12586:p.Phe26_Cys38delinsLeuPheLysThrIleAlaGluIleSerGlyGluGlyHis | ||||||||
HGVSg | CHROMOSOME_V:g.3805344_3805381delinsTGGCCCTCTCCGGAGATTTCGGCTATTGTCTTGAAAAG | |||||||
Sequence_details | SMap | S_parent | Sequence | R08F11 | ||||
Flanking_sequences | TTTTCTGCAATTTTTTCAGGAAGAACTGGG | GTTCAGACGATTCCCAATGTTGATTGCGTT | ||||||
Mapping_target | R08F11 | |||||||
Source_location | 225 | CHROMOSOME_V | 3805330 | 3805367 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGGCCCTCTCCGGAGATTTCGGCTATTGTCTTGAAAAG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019968 | ||||||
Transcript | R08F11.4.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | R08F11.4.1:c.76_113delinsCTTTTCAAGACAATAGCCGAAATCTCCGGAGAGGGCCA | |||||||
HGVSp | CE12586:p.Phe26_Cys38delinsLeuPheLysThrIleAlaGluIleSerGlyGluGlyHis | |||||||
cDNA_position | 99-137 | |||||||
CDS_position | 76-114 | |||||||
Protein_position | 26-38 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | TTTTTTAAGGTGATAGCCGAAATTTCCAATGCGGAGTGC/CTTTTCAAGACAATAGCCGAAATCTCCGGAGAGGGCCAC | |||||||
Amino_acid_change | FFKVIAEISNAEC/LFKTIAEISGEGH | |||||||
Method | WGS_Flibotte |