WormBase Tree Display for Variation: WBVar02084690
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WBVar02084690 | Name | Public_name | WBVar02084690 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00814375 | |||||||
CE25336:p.AlaValAspLeuLeu65= | ||||||||
Y49F6B.2.1:c.195_207delinsTGTTGATCTACTT | ||||||||
HGVSg | CHROMOSOME_II:g.3503256_3503268delinsTGTTGATCTACTT | |||||||
Sequence_details | SMap | S_parent | Sequence | Y49F6B | ||||
Flanking_sequences | AGAAGCGCCAAAAGAAGGAGCTTTTGAGGC | GGAACATCCTATTTGGAGCCATATGAGATG | ||||||
Mapping_target | Y49F6B | |||||||
Source_location | 225 | CHROMOSOME_II | 3503259 | 3503271 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGTTGATCTACTT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021715 | ||||||
Transcript | Y49F6B.2.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y49F6B.2.1:c.195_207delinsTGTTGATCTACTT | |||||||
HGVSp | CE25336:p.AlaValAspLeuLeu65= | |||||||
cDNA_position | 200-213 | |||||||
CDS_position | 194-207 | |||||||
Protein_position | 65-69 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | gCAGTTGACCTGCTC/gCTGTTGATCTACTT | |||||||
Amino_acid_change | AVDLL | |||||||
Method | WGS_Flibotte |