WormBase Tree Display for Variation: WBVar02080484
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WBVar02080484 | Name | Public_name | WBVar02080484 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00810056 | |||||||
F53G12.18.1:c.145-305_145-299delinsTACGATC | ||||||||
F56C11.1.2:c.*531_*537delinsGATCGTA | ||||||||
HGVSg | CHROMOSOME_I:g.146086_146092delinsTACGATC | |||||||
Sequence_details | SMap | S_parent | Sequence | F53G12 | ||||
Flanking_sequences | ATGATTTTGACCAGTGTCAGCTCAAAAAAA | GACAGAGAGAGGTGGCATTTTCGTTTTTTC | ||||||
Mapping_target | F53G12 | |||||||
Source_location | 225 | CHROMOSOME_I | 146086 | 146092 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TACGATC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00271776 | ||||||
WBGene00000253 | ||||||||
Transcript | F53G12.18.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53G12.18.1:c.145-305_145-299delinsTACGATC | |||||||
Intron_number | 2/3 | |||||||
F56C11.1.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56C11.1.2:c.*531_*537delinsGATCGTA | |||||||
cDNA_position | 5061-5068 | |||||||
Exon_number | 21/21 | |||||||
Method | WGS_Flibotte |