WormBase Tree Display for Variation: WBVar02050708
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WBVar02050708 | Name | Public_name | WBVar02050708 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00779887 | |||||||
Y15E3A.2.1:c.*87_*89del | ||||||||
Y15E3A.1b.1:c.*430_*432del | ||||||||
Y15E3A.1b.2:c.*430_*432del | ||||||||
Y15E3A.1a.3:c.*430_*432del | ||||||||
HGVSg | CHROMOSOME_X:g.15314895_15314897del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y15E3A | ||||
Flanking_sequences | TTTTTCTACGAAAGAAAAAAATTTATTGGT | ACATTTTTTTTAAATTTTACAGATTACAGA | ||||||
Mapping_target | Y15E3A | |||||||
Source_location | 225 | CHROMOSOME_X | 15314826 | 15314828 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003681 | ||||||
WBGene00012441 | ||||||||
Transcript | Y15E3A.2.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.2.1:c.*87_*89del | |||||||
cDNA_position | 769-771 | |||||||
Exon_number | 7/7 | |||||||
Y15E3A.1a.4 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
cDNA_position | 1865-? | |||||||
Exon_number | 11/11 | |||||||
Y15E3A.1b.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1b.1:c.*430_*432del | |||||||
cDNA_position | 1499-1501 | |||||||
Exon_number | 8/8 | |||||||
Y15E3A.1b.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1b.2:c.*430_*432del | |||||||
cDNA_position | 1921-1923 | |||||||
Exon_number | 10/10 | |||||||
Y15E3A.1a.3 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1a.3:c.*430_*432del | |||||||
cDNA_position | 1865-1867 | |||||||
Exon_number | 11/11 | |||||||
Y15E3A.1a.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
cDNA_position | 1859-? | |||||||
Exon_number | 11/11 | |||||||
Method | WGS_Flibotte |