WormBase Tree Display for Variation: WBVar02048084
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WBVar02048084 | Name | Public_name | WBVar02048084 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00777248 | |||||||
cewivar00808081 | ||||||||
T21C12.1c.2:c.*-227_*-121del | ||||||||
T21C12.1d.1:c.*-227_*-121del | ||||||||
T21C12.1f.1:c.563-227_563-121del | ||||||||
T21C12.1e.1:c.*-227_*-121del | ||||||||
T21C12.1c.1:c.*-227_*-121del | ||||||||
T21C12.1o.1:c.59-227_59-121del | ||||||||
T21C12.1h.1:c.-217_-111del | ||||||||
T21C12.1m.1:c.*-227_*-121del | ||||||||
HGVSg | CHROMOSOME_III:g.10530359_10530465del | |||||||
Sequence_details | SMap | S_parent | Sequence | T21C12 | ||||
Flanking_sequences | CTCCCGCCTCCCCCTTCCCCCCAATTTTCA | TGTAATTCTGTTGCTTTTCTTTCTCGTCGT | ||||||
Mapping_target | T21C12 | |||||||
Source_location | 225 | CHROMOSOME_III | 10530261 | 10530367 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
History | Acquires_merge | WBVar02078768 | ||||||
Status | Live | |||||||
Affects | Gene | WBGene00006784 | ||||||
Transcript | T21C12.1h.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1h.1:c.-217_-111del | |||||||
cDNA_position | 244-350 | |||||||
Exon_number | 1/7 | |||||||
T21C12.1m.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1m.1:c.*-227_*-121del | |||||||
Intron_number | 8/8 | |||||||
T21C12.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1c.1:c.*-227_*-121del | |||||||
Intron_number | 13/18 | |||||||
T21C12.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1e.1:c.*-227_*-121del | |||||||
Intron_number | 14/19 | |||||||
T21C12.1c.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1c.2:c.*-227_*-121del | |||||||
Intron_number | 13/14 | |||||||
T21C12.1o.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1o.1:c.59-227_59-121del | |||||||
Intron_number | 1/5 | |||||||
T21C12.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1d.1:c.*-227_*-121del | |||||||
Intron_number | 12/17 | |||||||
T21C12.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1f.1:c.563-227_563-121del | |||||||
Intron_number | 6/11 | |||||||
Method | WGS_Flibotte |