WormBase Tree Display for Variation: WBVar02045903
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WBVar02045903 | Name | Public_name | WBVar02045903 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00775037 | |||||||
F56B3.1.1:c.375_389del | ||||||||
CE17882:p.Gly126_Gly130del | ||||||||
HGVSg | CHROMOSOME_IV:g.763180_763194del | |||||||
Sequence_details | SMap | S_parent | Sequence | F56B3 | ||||
Flanking_sequences | CAGGTGTTGGAGCTTGGGGAGCATTGGCAT | CCACCACCTCCGTATCCTCCTCCGACGGCT | ||||||
Mapping_target | F56B3 | |||||||
Source_location | 225 | CHROMOSOME_IV | 763180 | 763194 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000677 | ||||||
Transcript | F56B3.1.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F56B3.1.1:c.375_389del | |||||||
HGVSp | CE17882:p.Gly126_Gly130del | |||||||
cDNA_position | 389-403 | |||||||
CDS_position | 375-389 | |||||||
Protein_position | 125-130 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | ggCGGCGGAGGTGGTGGa/gga | |||||||
Amino_acid_change | GGGGGG/G | |||||||
Method | WGS_Flibotte |