WormBase Tree Display for Variation: WBVar02010818

WBVar02010818 Name: Public_name: WBVar02010818
    Other_name: cewivar00739108
      CE30810:p.Arg127LysfsTer81
      CE50908:p.Arg109LysfsTer70
      CE51000:p.Arg109LysfsTer81
      F59A7.5b.1:c.325_332del
      F59A7.5c.1:c.379_386del
      F59A7.5a.1:c.379_386del
      CE51043:p.Arg127LysfsTer70
      F59A7.5d.1:c.325_332del
    HGVSg: CHROMOSOME_V:g.2023856_2023863del
  Sequence_details: SMap: S_parent: Sequence: F59A7
    Flanking_sequences: GACCAAAAAGACGGCCAAGAAGACCACCAC AAAGGGGGCTACAAAAAAGAAGGTGACCAC
    Mapping_target: F59A7
    Source_location: 225 CHROMOSOME_V 2023855 2023862 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00019092
    Transcript: F59A7.5b.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: F59A7.5b.1:c.325_332del
        HGVSp: CE51000:p.Arg109LysfsTer81
        cDNA_position: 387-394
        CDS_position: 325-332
        Protein_position: 109-111
        Exon_number: 5/7
        Codon_change: CGAAAAAAa/a
        Amino_acid_change: RKK/X
      F59A7.5a.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: F59A7.5a.1:c.379_386del
        HGVSp: CE30810:p.Arg127LysfsTer81
        cDNA_position: 396-403
        CDS_position: 379-386
        Protein_position: 127-129
        Exon_number: 5/7
        Codon_change: CGAAAAAAa/a
        Amino_acid_change: RKK/X
      F59A7.5d.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: F59A7.5d.1:c.325_332del
        HGVSp: CE50908:p.Arg109LysfsTer70
        cDNA_position: 343-350
        CDS_position: 325-332
        Protein_position: 109-111
        Exon_number: 5/8
        Codon_change: CGAAAAAAa/a
        Amino_acid_change: RKK/X
      F59A7.5c.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: F59A7.5c.1:c.379_386del
        HGVSp: CE51043:p.Arg127LysfsTer70
        cDNA_position: 385-392
        CDS_position: 379-386
        Protein_position: 127-129
        Exon_number: 5/8
        Codon_change: CGAAAAAAa/a
        Amino_acid_change: RKK/X
  Method: WGS_Flibotte