WormBase Tree Display for Variation: WBVar02006451
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WBVar02006451 | Name | Public_name | WBVar02006451 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00734066 | |||||||
K01A2.8a.1:c.309-134_309-122del | ||||||||
K01A2.8c.2:c.177-134_177-122del | ||||||||
K01A2.8c.3:c.177-134_177-122del | ||||||||
K01A2.4a.2:c.*95+347_*95+359del | ||||||||
K01A2.8d.1:c.324-134_324-122del | ||||||||
K01A2.8c.1:c.177-134_177-122del | ||||||||
HGVSg | CHROMOSOME_II:g.309891_309903del | |||||||
Sequence_details | SMap | S_parent | Sequence | K01A2 | ||||
Flanking_sequences | AATAAAACACTTCAAAAATTTTCAAAACGT | TTTTTTTTTGAAATTCGGTCATTTTGGCACCATTGAAGTAGTTTTAACACTGCCCCCCCG | ||||||
Mapping_target | K01A2 | |||||||
Source_location | 225 | CHROMOSOME_II | 309891 | 309903 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019279 | ||||||
WBGene00019282 | ||||||||
Transcript | K01A2.8d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8d.1:c.324-134_324-122del | |||||||
Intron_number | 3/4 | |||||||
K01A2.8c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8c.1:c.177-134_177-122del | |||||||
Intron_number | 3/5 | |||||||
K01A2.8a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8a.1:c.309-134_309-122del | |||||||
Intron_number | 4/6 | |||||||
K01A2.8c.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8c.2:c.177-134_177-122del | |||||||
Intron_number | 4/6 | |||||||
K01A2.8c.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8c.3:c.177-134_177-122del | |||||||
Intron_number | 4/6 | |||||||
K01A2.4a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.4a.2:c.*95+347_*95+359del | |||||||
Intron_number | 12/12 | |||||||
Method | WGS_Flibotte |