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WormBase Tree Display for Variation: WBVar01999348

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Name Class

WBVar01999348NamePublic_nameWBVar01999348
Other_namecewivar00726789
Y55D5A.5c.1:c.5230-107_5230-106del
Y55D5A.5d.1:c.4843-107_4843-106del
Y55D5A.5f.1:c.2554-107_2554-106del
Y55D5A.5g.1:c.1462-107_1462-106del
Y55D5A.5e.1:c.4756-107_4756-106del
Y55D5A.5a.1:c.4984-107_4984-106del
HGVSgCHROMOSOME_III:g.2998953_2998954del
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesGAAAAGATGATTTCATTACTTTAATCGAAATTTTTTTTTTCAATTTTTTTTTCAAATTTT
Mapping_targetY55D5A
Source_location225CHROMOSOME_III29989452998946From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006631From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5g.1:c.1462-107_1462-106del
Intron_number1/3
Y55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.4756-107_4756-106del
Intron_number12/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.2554-107_2554-106del
Intron_number5/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.4984-107_4984-106del
Intron_number15/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.5230-107_5230-106del
Intron_number17/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.4843-107_4843-106del
Intron_number13/15
MethodWGS_Flibotte