WormBase Tree Display for Variation: WBVar01994781
expand all nodes | collapse all nodes | view schema
WBVar01994781 | Name | Public_name | WBVar01994781 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00722049 | |||||||
Y55D5A.5d.1:c.4843-470del | ||||||||
Y55D5A.5f.1:c.2554-470del | ||||||||
Y55D5A.5g.1:c.1462-470del | ||||||||
Y55D5A.5a.1:c.4984-470del | ||||||||
Y55D5A.5e.1:c.4756-470del | ||||||||
Y55D5A.5c.1:c.5230-470del | ||||||||
HGVSg | CHROMOSOME_III:g.2999317del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
Flanking_sequences | TTCATTTATAACAATTTGCCCATTTGCCAG | AATTTTCAATTCTGGCAATTTGCAGATTTG | ||||||
Mapping_target | Y55D5A | |||||||
Source_location | 225 | CHROMOSOME_III | 2999309 | 2999309 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000898 | ||||||
Transcript | Y55D5A.5g.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5g.1:c.1462-470del | |||||||
Intron_number | 1/3 | |||||||
Y55D5A.5e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5e.1:c.4756-470del | |||||||
Intron_number | 12/14 | |||||||
Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5f.1:c.2554-470del | |||||||
Intron_number | 5/7 | |||||||
Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5a.1:c.4984-470del | |||||||
Intron_number | 15/18 | |||||||
Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5c.1:c.5230-470del | |||||||
Intron_number | 17/20 | |||||||
Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5d.1:c.4843-470del | |||||||
Intron_number | 13/15 | |||||||
Method | WGS_Flibotte |