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WormBase Tree Display for Variation: WBVar01989858

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Name Class

WBVar01989858NamePublic_nameWBVar01989858
Other_namecewivar00716557
Y55D5A.5d.1:c.5305-113del
Y55D5A.5e.1:c.5218-113del
Y55D5A.5c.1:c.5692-113del
Y55D5A.5a.1:c.5446-113del
Y55D5A.5g.1:c.1924-113del
Y55D5A.5f.1:c.3016-113del
HGVSgCHROMOSOME_III:g.2996127del
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesTTTTCATCGAATATTAGAATTTTTGAGCGGAAAATTAAAAAATTTTCAGTTTCTAGAATT
Mapping_targetY55D5A
Source_location225CHROMOSOME_III29961192996119From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5g.1:c.1924-113del
Intron_number3/3
Y55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.5218-113del
Intron_number14/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.3016-113del
Intron_number7/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.5446-113del
Intron_number17/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.5692-113del
Intron_number19/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.5305-113del
Intron_number15/15
MethodWGS_Flibotte