WormBase Tree Display for Variation: WBVar01982078
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WBVar01982078 | Name | Public_name | WBVar01982078 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00708209 | |||||||
C45E1.1a.1:c.861+147_861+157del | ||||||||
C45E1.1b.1:c.786+147_786+157del | ||||||||
C45E1.1a.2:c.861+147_861+157del | ||||||||
C45E1.1c.1:c.879+147_879+157del | ||||||||
HGVSg | CHROMOSOME_I:g.3108870_3108880del | |||||||
Sequence_details | SMap | S_parent | Sequence | C45E1 | ||||
Flanking_sequences | TGTATTAATAAAATCATACGAATCAAGGGT | GATTTTTTCTGGCAAATTGAAAAATCGGCA | ||||||
Mapping_target | C45E1 | |||||||
Source_location | 225 | CHROMOSOME_I | 3108872 | 3108882 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003654 | ||||||
Transcript | C45E1.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C45E1.1b.1:c.786+147_786+157del | |||||||
Intron_number | 6/6 | |||||||
C45E1.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C45E1.1c.1:c.879+147_879+157del | |||||||
Intron_number | 8/8 | |||||||
C45E1.1a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C45E1.1a.2:c.861+147_861+157del | |||||||
Intron_number | 9/10 | |||||||
C45E1.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C45E1.1a.1:c.861+147_861+157del | |||||||
Intron_number | 8/9 | |||||||
Method | WGS_Flibotte |