WormBase Tree Display for Variation: WBVar01980167

WBVar01980167 Name: Public_name: WBVar01980167
    Other_name: cewivar00706245
      F56B6.2j.1:c.1947-629del
      F56B6.2f.1:c.-95del
      F56B6.2i.1:c.1944-629del
      F56B6.2a.1:c.1938-629del
      F56B6.2b.1:c.1827-629del
      F56B6.2e.1:c.453-629del
      F56B6.2c.1:c.753-629del
      F56B6.2h.1:c.1953-629del
    HGVSg: CHROMOSOME_X:g.3555811del
  Sequence_details: SMap: S_parent: Sequence: F56B6
    Flanking_sequences: AGTGCAGTTCACCCATTACTCTTCCCATCT CCCCCCCCTTTTCTCCCTATTGCGCACTAT
    Mapping_target: F56B6
    Source_location: 225 CHROMOSOME_X 3555798 3555798 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022868 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00004350
    Transcript: F56B6.2e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56B6.2e.1:c.453-629del
        Intron_number: 3/7
      F56B6.2i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56B6.2i.1:c.1944-629del
        Intron_number: 12/16
      F56B6.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56B6.2a.1:c.1938-629del
        Intron_number: 12/16
      F56B6.2h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56B6.2h.1:c.1953-629del
        Intron_number: 12/16
      F56B6.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56B6.2c.1:c.753-629del
        Intron_number: 6/9
      F56B6.2f.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F56B6.2f.1:c.-95del
        cDNA_position: 30
        Exon_number: 1/7
      F56B6.2j.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56B6.2j.1:c.1947-629del
        Intron_number: 11/14
      F56B6.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56B6.2b.1:c.1827-629del
        Intron_number: 11/15
  Method: WGS_Flibotte