WormBase Tree Display for Variation: WBVar01972500
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WBVar01972500 | Name | Public_name | WBVar01972500 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00698477 | |||||||
W08A12.1c.1:c.1213-107del | ||||||||
W08A12.1a.1:c.1402-107del | ||||||||
W08A12.1e.1:c.1156-107del | ||||||||
W08A12.1b.1:c.1231-107del | ||||||||
W08A12.1d.1:c.1354-107del | ||||||||
W08A12.1b.3:c.1231-107del | ||||||||
W08A12.1b.2:c.1231-107del | ||||||||
HGVSg | CHROMOSOME_V:g.3701130del | |||||||
Sequence_details | SMap | S_parent | Sequence | W08A12 | ||||
Flanking_sequences | GTAAAAAAAATTGCTCGGAAAGTTTTTCAA | TTTTTTTTCTCTGAAAAATCGAAAAACCGA | ||||||
Mapping_target | W08A12 | |||||||
Source_location | 225 | CHROMOSOME_V | 3701117 | 3701117 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021078 | ||||||
Transcript | W08A12.1b.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | W08A12.1b.3:c.1231-107del | |||||||
Intron_number | 6/7 | |||||||
W08A12.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W08A12.1a.1:c.1402-107del | |||||||
Intron_number | 6/7 | |||||||
W08A12.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W08A12.1c.1:c.1213-107del | |||||||
Intron_number | 6/7 | |||||||
W08A12.1b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W08A12.1b.2:c.1231-107del | |||||||
Intron_number | 7/8 | |||||||
W08A12.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W08A12.1b.1:c.1231-107del | |||||||
Intron_number | 7/8 | |||||||
W08A12.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W08A12.1d.1:c.1354-107del | |||||||
Intron_number | 4/5 | |||||||
W08A12.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W08A12.1e.1:c.1156-107del | |||||||
Intron_number | 4/4 | |||||||
Method | WGS_Flibotte |