WormBase Tree Display for Variation: WBVar01967191
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WBVar01967191 | Name | Public_name | WBVar01967191 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00693152 | |||||||
CE49919:p.Ser229_Thr232del | ||||||||
C25G4.1.1:c.670_681del | ||||||||
HGVSg | CHROMOSOME_IV:g.12440064_12440075del | |||||||
Sequence_details | SMap | S_parent | Sequence | C25G4 | ||||
Flanking_sequences | AGTATCTGCAAGTATTGCCCACAAGAGACT | ACGTCGACGAGCACGACAACAACAACGATA | ||||||
Mapping_target | C25G4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 12440041 | 12440052 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007729 | ||||||
Transcript | C25G4.1.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | C25G4.1.1:c.670_681del | |||||||
HGVSp | CE49919:p.Ser229_Thr232del | |||||||
cDNA_position | 690-701 | |||||||
CDS_position | 670-681 | |||||||
Protein_position | 224-227 | |||||||
Exon_number | 6/9 | |||||||
Codon_change | ACGTCGACGAGC/- | |||||||
Amino_acid_change | TSTS/- | |||||||
Method | WGS_Flibotte |