WormBase Tree Display for Variation: WBVar01945947
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WBVar01945947 | Name | Public_name | WBVar01945947 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00667472 | |||||||
T06H11.1f.1:c.413-2804_413-2790del | ||||||||
T06H11.1b.1:c.263-2804_263-2790del | ||||||||
T06H11.1c.1:c.149-2804_149-2790del | ||||||||
T06H11.1g.1:c.136+1537_136+1551del | ||||||||
T06H11.1d.1:c.293-2804_293-2790del | ||||||||
HGVSg | CHROMOSOME_X:g.10112121_10112135del | |||||||
Sequence_details | SMap | S_parent | Sequence | T06H11 | ||||
Flanking_sequences | TTTAATGTTTTCGGTTACAATTGTTTTTAT | AGTCTTTAATAAAAAATGCAAATAATTATA | ||||||
Mapping_target | T06H11 | |||||||
Source_location | 225 | CHROMOSOME_X | 10112062 | 10112076 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006792 | ||||||
Transcript | T06H11.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1b.1:c.263-2804_263-2790del | |||||||
Intron_number | 3/12 | |||||||
T06H11.1g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1g.1:c.136+1537_136+1551del | |||||||
Intron_number | 2/12 | |||||||
T06H11.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1f.1:c.413-2804_413-2790del | |||||||
Intron_number | 4/14 | |||||||
T06H11.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1d.1:c.293-2804_293-2790del | |||||||
Intron_number | 1/11 | |||||||
T06H11.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1c.1:c.149-2804_149-2790del | |||||||
Intron_number | 2/13 | |||||||
Method | WGS_Flibotte |