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WormBase Tree Display for Variation: WBVar01935660

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Name Class

WBVar01935660NamePublic_nameWBVar01935660
Other_namecewivar00655679
CE02972:p.Met71IlefsTer3
C05D12.3c.3:c.*282+10_*282+16del
C05D12.3c.2:c.*1541_*1547del
C05D12.3c.1:c.*292_*298del
C05D12.4.1:c.211_217del
HGVSgCHROMOSOME_II:g.11432094_11432100del
Sequence_detailsSMapS_parentSequenceC05D12
Flanking_sequencesGTAGAATTCTACAGACGCGCTGTAATGTTTATCAACTGATTGAAAAAGATGCAGTGATTG
Mapping_targetC05D12
Source_location225CHROMOSOME_II1143203011432036From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00007341
WBGene00014666
TranscriptC05D12.4.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScC05D12.4.1:c.211_217del
HGVSpCE02972:p.Met71IlefsTer3
cDNA_position211-217
CDS_position211-217
Protein_position71-73
Exon_number1/1
Codon_changeATGGAAAat/at
Amino_acid_changeMEN/X
C05D12.3c.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScC05D12.3c.1:c.*292_*298del
cDNA_position3313-3319
Exon_number18/18
C05D12.3c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC05D12.3c.3:c.*282+10_*282+16del
Intron_number17/17
C05D12.3c.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScC05D12.3c.2:c.*1541_*1547del
cDNA_position4561-4567
Exon_number17/17
MethodWGS_Flibotte