WormBase Tree Display for Variation: WBVar01923070
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WBVar01923070 | Name | Public_name | WBVar01923070 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00641488 | |||||||
W02C12.3d.2:c.1-1043del | ||||||||
W02C12.3b.1:c.-20del | ||||||||
W02C12.3i.1:c.28-1043del | ||||||||
W02C12.3j.1:c.28-1043del | ||||||||
W02C12.3c.1:c.-20del | ||||||||
HGVSg | CHROMOSOME_IV:g.4028106del | |||||||
Sequence_details | SMap | S_parent | Sequence | F35F11 | ||||
Flanking_sequences | TGGCGGATCATGAATGCTCTTATTCGCTGA | TTTTTTTTTCAGTATCGGGATCTGAGAATT | ||||||
Mapping_target | F35F11 | |||||||
Source_location | 225 | CHROMOSOME_IV | 4028100 | 4028100 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020930 | ||||||
Transcript | W02C12.3j.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3j.1:c.28-1043del | |||||||
Intron_number | 1/9 | |||||||
W02C12.3b.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3b.1:c.-20del | |||||||
cDNA_position | 22 | |||||||
Exon_number | 1/12 | |||||||
W02C12.3c.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3c.1:c.-20del | |||||||
cDNA_position | 22 | |||||||
Exon_number | 1/13 | |||||||
W02C12.3i.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3i.1:c.28-1043del | |||||||
Intron_number | 1/10 | |||||||
W02C12.3d.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3d.2:c.1-1043del | |||||||
Intron_number | 1/11 | |||||||
Method | WGS_Flibotte |