WormBase Tree Display for Variation: WBVar01918558
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| WBVar01918558 | Name | Public_name | WBVar01918558 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00636173 | |||||||
| Y55D5A.5d.1:c.2977-255del | ||||||||
| Y55D5A.5c.1:c.3364-255del | ||||||||
| Y55D5A.5a.1:c.3118-255del | ||||||||
| Y55D5A.5e.1:c.2890-255del | ||||||||
| Y55D5A.5f.1:c.688-255del | ||||||||
| HGVSg | CHROMOSOME_III:g.3005155del | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
| Flanking_sequences | AAAAAAAGTTATGGCGGTTCAAAGTTCGGC | AAAAAAAAGGCCCATTTTCAGCTAAAATCAAAACTTTTTC | ||||||
| Mapping_target | Y55D5A | |||||||
| Source_location | 225 | CHROMOSOME_III | 3005147 | 3005147 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Deletion | |||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00000898 | ||||||
| Transcript | Y55D5A.5e.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5e.1:c.2890-255del | |||||||
| Intron_number | 10/14 | |||||||
| Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5f.1:c.688-255del | |||||||
| Intron_number | 3/7 | |||||||
| Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5a.1:c.3118-255del | |||||||
| Intron_number | 13/18 | |||||||
| Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5c.1:c.3364-255del | |||||||
| Intron_number | 15/20 | |||||||
| Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5d.1:c.2977-255del | |||||||
| Intron_number | 11/15 | |||||||
| Method | WGS_Flibotte |
