WormBase Tree Display for Variation: WBVar01917563
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WBVar01917563 | Name | Public_name | WBVar01917563 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00634922 | |||||||
CE36131:p.Cys313ThrfsTer29 | ||||||||
F15D4.5.1:c.933_936del | ||||||||
HGVSg | CHROMOSOME_II:g.13247002_13247005del | |||||||
Sequence_details | SMap | S_parent | Sequence | F15D4 | ||||
Flanking_sequences | TAATAATACCCAAGAAGCCATCAATCGCCA | TGTCACCTCTCCACCATTTTACCACGAATG | ||||||
Mapping_target | F15D4 | |||||||
Source_location | 225 | CHROMOSOME_II | 13246932 | 13246935 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (17) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008862 | ||||||
Transcript | F15D4.5.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | F15D4.5.1:c.933_936del | |||||||
HGVSp | CE36131:p.Cys313ThrfsTer29 | |||||||
cDNA_position | 987-990 | |||||||
CDS_position | 933-936 | |||||||
Protein_position | 311-312 | |||||||
Exon_number | 6/9 | |||||||
Codon_change | caTGTG/ca | |||||||
Amino_acid_change | HV/X | |||||||
Method | WGS_Flibotte |