WormBase Tree Display for Variation: WBVar01909412
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WBVar01909412 | Name | Public_name | WBVar01909412 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (11) | ||||||||
HGVSg | CHROMOSOME_X:g.11814645C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C34E11 | ||||
Flanking_sequences | TTCGCGTATAGTCTCTCCCGGGTCATAGGC | CTATGCATCGATGGCTTATAGGGGATAAGA | ||||||
Mapping_target | C34E11 | |||||||
Source_location | 225 | CHROMOSOME_X | 11814577 | 11814577 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007935 | ||||||
Transcript | C34E11.2g.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C34E11.2g.1:c.9G>A | |||||||
HGVSp | CE53468:p.Arg3= | |||||||
cDNA_position | 9 | |||||||
CDS_position | 9 | |||||||
Protein_position | 3 | |||||||
Exon_number | 1/13 | |||||||
Codon_change | agG/agA | |||||||
Amino_acid_change | R | |||||||
C34E11.2a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C34E11.2a.1:c.9G>A | |||||||
HGVSp | CE53314:p.Arg3= | |||||||
cDNA_position | 9 | |||||||
CDS_position | 9 | |||||||
Protein_position | 3 | |||||||
Exon_number | 1/16 | |||||||
Codon_change | agG/agA | |||||||
Amino_acid_change | R | |||||||
C34E11.2f.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C34E11.2f.1:c.9G>A | |||||||
HGVSp | CE53279:p.Arg3= | |||||||
cDNA_position | 106 | |||||||
CDS_position | 9 | |||||||
Protein_position | 3 | |||||||
Exon_number | 2/16 | |||||||
Codon_change | agG/agA | |||||||
Amino_acid_change | R | |||||||
C34E11.2e.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C34E11.2e.1:c.9G>A | |||||||
HGVSp | CE53366:p.Arg3= | |||||||
cDNA_position | 9 | |||||||
CDS_position | 9 | |||||||
Protein_position | 3 | |||||||
Exon_number | 1/16 | |||||||
Codon_change | agG/agA | |||||||
Amino_acid_change | R | |||||||
C34E11.2d.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C34E11.2d.1:c.9G>A | |||||||
HGVSp | CE53474:p.Arg3= | |||||||
cDNA_position | 9 | |||||||
CDS_position | 9 | |||||||
Protein_position | 3 | |||||||
Exon_number | 1/15 | |||||||
Codon_change | agG/agA | |||||||
Amino_acid_change | R | |||||||
Method | WGS_Flibotte |