WormBase Tree Display for Variation: WBVar01903591
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WBVar01903591 | Name | Public_name | WBVar01903591 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00619260 | |||||||
T24C4.8.1:c.-1302C>A | ||||||||
T24C4.4.1:c.322G>T | ||||||||
CE39413:p.Ala108Ser | ||||||||
HGVSg | CHROMOSOME_III:g.873057C>A | |||||||
Sequence_details | SMap | S_parent | Sequence | T24C4 | ||||
Flanking_sequences | CATTAGCAGCCATTAGAATAAAGGCAACTG | TTGTAGAATAACAATCAATGAACACAGTAG | ||||||
Mapping_target | T24C4 | |||||||
Source_location | 225 | CHROMOSOME_III | 873046 | 873046 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044681 | ||||||
WBGene00020760 | ||||||||
Transcript | T24C4.8.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T24C4.8.1:c.-1302C>A | |||||||
cDNA_position | 475 | |||||||
Exon_number | 1/6 | |||||||
T24C4.4.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | T24C4.4.1:c.322G>T | |||||||
HGVSp | CE39413:p.Ala108Ser | |||||||
cDNA_position | 412 | |||||||
CDS_position | 322 | |||||||
Protein_position | 108 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | Gca/Tca | |||||||
Amino_acid_change | A/S | |||||||
Method | WGS_Flibotte |