WormBase Tree Display for Variation: WBVar01889127
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WBVar01889127 | Name | Public_name | WBVar01889127 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00604157 | |||||||
T05A10.1m.1:c.108+1003G>A | ||||||||
T05A10.1c.1:c.-1612+1003G>A | ||||||||
T05A10.1b.1:c.108+1003G>A | ||||||||
HGVSg | CHROMOSOME_X:g.10770404G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | T05A10 | ||||
Flanking_sequences | GTATAACTTTTTAATTATGGAAAATGATCA | TGTAAACTTTCAAAAATTATAAAAAAGAGT | ||||||
Mapping_target | T05A10 | |||||||
Source_location | 225 | CHROMOSOME_X | 10770339 | 10770339 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004862 | ||||||
Transcript | T05A10.1m.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T05A10.1m.1:c.108+1003G>A | |||||||
Intron_number | 2/26 | |||||||
T05A10.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T05A10.1b.1:c.108+1003G>A | |||||||
Intron_number | 2/8 | |||||||
T05A10.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T05A10.1c.1:c.-1612+1003G>A | |||||||
Intron_number | 1/27 | |||||||
Method | WGS_Flibotte |