WormBase Tree Display for Variation: WBVar01873974
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WBVar01873974 | Name | Public_name | WBVar01873974 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00588285 | |||||||
F36G9.14.1:c.897A>G | ||||||||
CE15991:p.Lys299= | ||||||||
F36G9.12.1:c.*64T>C | ||||||||
HGVSg | CHROMOSOME_V:g.15981730T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F36G9 | ||||
Flanking_sequences | ATTTTATTGAAACTCATAAATGTTTTTATA | TTCTTTTTAATATGAAGGAAATCAGAGTAA | ||||||
Mapping_target | F36G9 | |||||||
Source_location | 225 | CHROMOSOME_V | 15981710 | 15981710 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009490 | ||||||
WBGene00009488 | ||||||||
Transcript | F36G9.12.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F36G9.12.1:c.*64T>C | |||||||
cDNA_position | 2235 | |||||||
Exon_number | 11/11 | |||||||
F36G9.14.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F36G9.14.1:c.897A>G | |||||||
HGVSp | CE15991:p.Lys299= | |||||||
cDNA_position | 960 | |||||||
CDS_position | 897 | |||||||
Protein_position | 299 | |||||||
Exon_number | 4/5 | |||||||
Codon_change | aaA/aaG | |||||||
Amino_acid_change | K | |||||||
Method | WGS_Flibotte |