WormBase Tree Display for Variation: WBVar01870988
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WBVar01870988 | Name | Public_name | WBVar01870988 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00585169 | |||||||
F35E12.6.1:c.270T>A | ||||||||
F35E12.6.2:c.270T>A | ||||||||
CE35523:p.Ser90= | ||||||||
HGVSg | CHROMOSOME_V:g.13735479A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F35E12 | ||||
Flanking_sequences | AGCAAATTCAATTCTTTTCTCAGCTGGAGA | GAAATGCTGAAACAATTAGATGTGTTATTG | ||||||
Mapping_target | F35E12 | |||||||
Source_location | 225 | CHROMOSOME_V | 13735466 | 13735466 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009430 | ||||||
Transcript | F35E12.6.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F35E12.6.1:c.270T>A | |||||||
HGVSp | CE35523:p.Ser90= | |||||||
cDNA_position | 273 | |||||||
CDS_position | 270 | |||||||
Protein_position | 90 | |||||||
Exon_number | 5/11 | |||||||
Codon_change | tcT/tcA | |||||||
Amino_acid_change | S | |||||||
F35E12.6.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F35E12.6.2:c.270T>A | |||||||
HGVSp | CE35523:p.Ser90= | |||||||
cDNA_position | 310 | |||||||
CDS_position | 270 | |||||||
Protein_position | 90 | |||||||
Exon_number | 6/12 | |||||||
Codon_change | tcT/tcA | |||||||
Amino_acid_change | S | |||||||
Method | WGS_Flibotte |