WormBase Tree Display for Variation: WBVar01860697
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WBVar01860697 | Name | Public_name | WBVar01860697 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00574266 | |||||||
CE51587:p.Pro141= | ||||||||
CE42293:p.Pro180= | ||||||||
C49G7.10b.1:c.423G>T | ||||||||
C49G7.10a.1:c.540G>T | ||||||||
HGVSg | CHROMOSOME_V:g.4040844C>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C49G7 | ||||
Flanking_sequences | GTACGCAACTTTGGCATTCTGATACAGCTC | GGCTTTTTGGCACTTTTTGATTTTGAAGGA | ||||||
Mapping_target | C49G7 | |||||||
Source_location | 225 | CHROMOSOME_V | 4040829 | 4040829 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016788 | ||||||
Transcript | C49G7.10b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C49G7.10b.1:c.423G>T | |||||||
HGVSp | CE51587:p.Pro141= | |||||||
cDNA_position | 423 | |||||||
CDS_position | 423 | |||||||
Protein_position | 141 | |||||||
Exon_number | 2/3 | |||||||
Codon_change | ccG/ccT | |||||||
Amino_acid_change | P | |||||||
C49G7.10a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C49G7.10a.1:c.540G>T | |||||||
HGVSp | CE42293:p.Pro180= | |||||||
cDNA_position | 570 | |||||||
CDS_position | 540 | |||||||
Protein_position | 180 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | ccG/ccT | |||||||
Amino_acid_change | P | |||||||
Method | WGS_Flibotte |