WormBase Tree Display for Variation: WBVar01858753
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WBVar01858753 | Name | Public_name | WBVar01858753 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00572230 | |||||||
CE05332:p.Ser655= | ||||||||
C29E6.1c.1:c.1965C>T | ||||||||
C29E6.1b.1:c.1845C>T | ||||||||
CE37323:p.Ser615= | ||||||||
CE40548:p.Ser774= | ||||||||
C29E6.1a.1:c.2322C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.11890727C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C29E6 | ||||
Flanking_sequences | AAATCCGTCGAAATCTAAAAATTTCACAAG | GTTGTTGGTTGGTTCAAATTTAGTTTATTT | ||||||
Mapping_target | C29E6 | |||||||
Source_location | 225 | CHROMOSOME_IV | 11890704 | 11890704 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002827 | ||||||
Transcript | C29E6.1b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C29E6.1b.1:c.1845C>T | |||||||
HGVSp | CE37323:p.Ser615= | |||||||
cDNA_position | 1850 | |||||||
CDS_position | 1845 | |||||||
Protein_position | 615 | |||||||
Exon_number | 9/11 | |||||||
Codon_change | agC/agT | |||||||
Amino_acid_change | S | |||||||
C29E6.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29E6.1a.1:c.2322C>T | |||||||
HGVSp | CE40548:p.Ser774= | |||||||
cDNA_position | 2325 | |||||||
CDS_position | 2322 | |||||||
Protein_position | 774 | |||||||
Exon_number | 10/12 | |||||||
Codon_change | agC/agT | |||||||
Amino_acid_change | S | |||||||
C29E6.1c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29E6.1c.1:c.1965C>T | |||||||
HGVSp | CE05332:p.Ser655= | |||||||
cDNA_position | 1965 | |||||||
CDS_position | 1965 | |||||||
Protein_position | 655 | |||||||
Exon_number | 9/10 | |||||||
Codon_change | agC/agT | |||||||
Amino_acid_change | S | |||||||
Method | WGS_Flibotte |