WormBase Tree Display for Variation: WBVar01857272
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WBVar01857272 | Name | Public_name | WBVar01857272 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00570640 | |||||||
CE42573:p.Pro77= | ||||||||
R102.11a.1:c.231G>A | ||||||||
R102.11b.1:c.120G>A | ||||||||
CE44681:p.Pro40= | ||||||||
HGVSg | CHROMOSOME_IV:g.10698659C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | R102 | ||||
Flanking_sequences | TTACAGTAAAATTACCTGATACATGGTTAC | GGTGGCGGGCACGAGCAGGCAGGCGGAGGA | ||||||
Mapping_target | R102 | |||||||
Source_location | 225 | CHROMOSOME_IV | 10698639 | 10698639 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00077714 | ||||||
Transcript | R102.11a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | R102.11a.1:c.231G>A | |||||||
HGVSp | CE42573:p.Pro77= | |||||||
cDNA_position | 425 | |||||||
CDS_position | 231 | |||||||
Protein_position | 77 | |||||||
Exon_number | 3/5 | |||||||
Codon_change | ccG/ccA | |||||||
Amino_acid_change | P | |||||||
R102.11b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | R102.11b.1:c.120G>A | |||||||
HGVSp | CE44681:p.Pro40= | |||||||
cDNA_position | 120 | |||||||
CDS_position | 120 | |||||||
Protein_position | 40 | |||||||
Exon_number | 1/2 | |||||||
Codon_change | ccG/ccA | |||||||
Amino_acid_change | P | |||||||
Method | WGS_Flibotte |