WormBase Tree Display for Variation: WBVar01786826
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WBVar01786826 | Name | Public_name | WBVar01786826 | ||
---|---|---|---|---|---|
Other_name (11) | |||||
HGVSg | CHROMOSOME_X:g.3556217C>T | ||||
Sequence_details (6) | |||||
Variation_type | Natural_variant | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||
Laboratory | VC | ||||
Analysis | Million_mutation_project_reanalysis | ||||
Status | Live | ||||
Affects | Gene | WBGene00004350 | |||
Transcript | F56B6.2g.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F56B6.2g.1:c.4C>T | ||||
HGVSp | CE42124:p.Leu2= | ||||
cDNA_position | 112 | ||||
CDS_position | 4 | ||||
Protein_position | 2 | ||||
Exon_number | 2/7 | ||||
Codon_change | Ctg/Ttg | ||||
Amino_acid_change | L | ||||
F56B6.2e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2e.1:c.453-223C>T | ||||
Intron_number | 3/7 | ||||
F56B6.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2i.1:c.1944-223C>T | ||||
Intron_number | 12/16 | ||||
F56B6.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2a.1:c.1938-223C>T | ||||
Intron_number | 12/16 | ||||
F56B6.2h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2h.1:c.1953-223C>T | ||||
Intron_number | 12/16 | ||||
F56B6.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2c.1:c.753-223C>T | ||||
Intron_number | 6/9 | ||||
F56B6.2j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2j.1:c.1947-223C>T | ||||
Intron_number | 11/14 | ||||
F56B6.2f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2f.1:c.200+112C>T | ||||
Intron_number | 2/6 | ||||
F56B6.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2b.1:c.1827-223C>T | ||||
Intron_number | 11/15 | ||||
Method | WGS_Flibotte |