WormBase Tree Display for Variation: WBVar01752738
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WBVar01752738 | Name | Public_name | WBVar01752738 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00452314 | |||||||
Y60A3A.1.1:c.2214C>A | ||||||||
CE24516:p.Ala738= | ||||||||
HGVSg | CHROMOSOME_V:g.19997420G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | ||||
Flanking_sequences | GTCGTTGAGCTGATTGAGCACCTGCTGCAC | GCGACACTCGGATGAAGTACCCGATTTGCC | ||||||
Mapping_target | Y60A3A | |||||||
Source_location | 225 | CHROMOSOME_V | 19997389 | 19997389 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006786 | ||||||
Transcript | Y60A3A.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y60A3A.1.1:c.2214C>A | |||||||
HGVSp | CE24516:p.Ala738= | |||||||
cDNA_position | 2279 | |||||||
CDS_position | 2214 | |||||||
Protein_position | 738 | |||||||
Exon_number | 8/11 | |||||||
Codon_change | gcC/gcA | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |