WormBase Tree Display for Variation: WBVar01740138
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WBVar01740138 | Name | Public_name | WBVar01740138 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00439163 | |||||||
B0238.12.1:c.-888A>G | ||||||||
B0238.12.2:c.-557-331A>G | ||||||||
HGVSg | CHROMOSOME_V:g.5267015A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | B0238 | ||||
Flanking_sequences | AGCTATCTAGATACTGAAAATCTTAATTTG | AAATTACCTGACTGGCAATTTTGTATAAAA | ||||||
Mapping_target | B0238 | |||||||
Source_location | 225 | CHROMOSOME_V | 5266999 | 5266999 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00015076 | ||||||
Transcript | B0238.12.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | B0238.12.2:c.-557-331A>G | |||||||
Intron_number | 1/6 | |||||||
B0238.12.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | B0238.12.1:c.-888A>G | |||||||
cDNA_position | 1172 | |||||||
Exon_number | 1/6 | |||||||
Method | WGS_Flibotte |