WormBase Tree Display for Variation: WBVar01727277
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WBVar01727277 | Name | Public_name | WBVar01727277 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00425692 | |||||||
W02C12.3d.1:c.186+1643G>T | ||||||||
W02C12.3c.1:c.366+1643G>T | ||||||||
W02C12.3b.1:c.366+1643G>T | ||||||||
W02C12.3j.1:c.213+1643G>T | ||||||||
W02C12.3d.2:c.186+1643G>T | ||||||||
W02C12.3i.1:c.213+1643G>T | ||||||||
W02C12.3e.1:c.186+1643G>T | ||||||||
HGVSg | CHROMOSOME_IV:g.4025235C>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F35F11 | ||||
Flanking_sequences | GATAACGAAATTTGTACAAGTTTCGAATTC | TGGGAAACAAACTCTAATGGTCGAAAAAAT | ||||||
Mapping_target | F35F11 | |||||||
Source_location | 225 | CHROMOSOME_IV | 4025229 | 4025229 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020930 | ||||||
Transcript | W02C12.3e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3e.1:c.186+1643G>T | |||||||
Intron_number | 1/9 | |||||||
W02C12.3d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3d.1:c.186+1643G>T | |||||||
Intron_number | 1/10 | |||||||
W02C12.3j.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3j.1:c.213+1643G>T | |||||||
Intron_number | 2/9 | |||||||
W02C12.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3b.1:c.366+1643G>T | |||||||
Intron_number | 3/11 | |||||||
W02C12.3c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3c.1:c.366+1643G>T | |||||||
Intron_number | 3/12 | |||||||
W02C12.3i.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3i.1:c.213+1643G>T | |||||||
Intron_number | 2/10 | |||||||
W02C12.3d.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02C12.3d.2:c.186+1643G>T | |||||||
Intron_number | 2/11 | |||||||
Method | WGS_Flibotte |