WormBase Tree Display for Variation: WBVar01725474
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WBVar01725474 | Name | Public_name | WBVar01725474 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00423805 | |||||||
C34H4.1b.1:c.135A>G | ||||||||
C34H4.1a.2:c.1035A>G | ||||||||
CE48846:p.Glu45= | ||||||||
CE25804:p.Glu345= | ||||||||
C34H4.1a.1:c.1035A>G | ||||||||
HGVSg | CHROMOSOME_IV:g.1557319A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y41D4B | ||||
Flanking_sequences | TTTGTACATGGATCACACGAATACGAACGA | GGAATCTTCTATCTACAGTATTGCAGATCA | ||||||
Mapping_target | Y41D4B | |||||||
Source_location | 225 | CHROMOSOME_IV | 1557318 | 1557318 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016424 | ||||||
Transcript | C34H4.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C34H4.1a.1:c.1035A>G | |||||||
HGVSp | CE25804:p.Glu345= | |||||||
cDNA_position | 1036 | |||||||
CDS_position | 1035 | |||||||
Protein_position | 345 | |||||||
Exon_number | 7/9 | |||||||
Codon_change | gaA/gaG | |||||||
Amino_acid_change | E | |||||||
C34H4.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C34H4.1a.2:c.1035A>G | |||||||
HGVSp | CE25804:p.Glu345= | |||||||
cDNA_position | 1035 | |||||||
CDS_position | 1035 | |||||||
Protein_position | 345 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | gaA/gaG | |||||||
Amino_acid_change | E | |||||||
C34H4.1b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C34H4.1b.1:c.135A>G | |||||||
HGVSp | CE48846:p.Glu45= | |||||||
cDNA_position | 135 | |||||||
CDS_position | 135 | |||||||
Protein_position | 45 | |||||||
Exon_number | 2/3 | |||||||
Codon_change | gaA/gaG | |||||||
Amino_acid_change | E | |||||||
Method | WGS_Flibotte |