WormBase Tree Display for Variation: WBVar01720157
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WBVar01720157 | Name | Public_name | WBVar01720157 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00418312 | |||||||
C15F1.2.1:c.580C>T | ||||||||
CE23545:p.Pro194Ser | ||||||||
HGVSg | CHROMOSOME_II:g.6986027C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C15F1 | ||||
Flanking_sequences | GATGACTGTAAAAAGGGAATGCCGATTGCT | CAATATTTTTAGATGGATTACTATTTTCTG | ||||||
Mapping_target | C15F1 | |||||||
Source_location | 225 | CHROMOSOME_II | 6985985 | 6985985 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00015795 | ||||||
Transcript | C15F1.2.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | C15F1.2.1:c.580C>T | |||||||
HGVSp | CE23545:p.Pro194Ser | |||||||
cDNA_position | 633 | |||||||
CDS_position | 580 | |||||||
Protein_position | 194 | |||||||
Exon_number | 6/14 | |||||||
Codon_change | Cca/Tca | |||||||
Amino_acid_change | P/S | |||||||
Method | WGS_Flibotte |