WormBase Tree Display for Variation: WBVar01715493
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WBVar01715493 | Name | Public_name | WBVar01715493 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00413428 | |||||||
K01A2.8c.3:c.-327T>C | ||||||||
K01A2.8c.2:c.-55-350T>C | ||||||||
K01A2.4a.2:c.*95+1249A>G | ||||||||
K01A2.8d.1:c.93-350T>C | ||||||||
K01A2.8a.1:c.-96T>C | ||||||||
K01A2.8c.1:c.-405T>C | ||||||||
HGVSg | CHROMOSOME_II:g.310793A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | K01A2 | ||||
Flanking_sequences | GTCTGGTGGGAGTCGCCCTACTGTTACCGT | CGCGATCGTGCCAGATCTCGTAGATAAAAT | ||||||
Mapping_target | K01A2 | |||||||
Source_location | 225 | CHROMOSOME_II | 310793 | 310793 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00305491 | ||||||
WBGene00019279 | ||||||||
WBGene00305493 | ||||||||
WBGene00305490 | ||||||||
WBGene00019282 | ||||||||
WBGene00305492 | ||||||||
Transcript | K01A2.19 | |||||||
K01A2.16 | ||||||||
K01A2.8c.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8c.1:c.-405T>C | |||||||
cDNA_position | 106 | |||||||
Exon_number | 1/6 | |||||||
K01A2.8a.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8a.1:c.-96T>C | |||||||
cDNA_position | 102 | |||||||
Exon_number | 1/7 | |||||||
K01A2.8c.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8c.2:c.-55-350T>C | |||||||
Intron_number | 1/6 | |||||||
K01A2.8c.3 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8c.3:c.-327T>C | |||||||
cDNA_position | 1383 | |||||||
Exon_number | 1/7 | |||||||
K01A2.17 | ||||||||
K01A2.18 | ||||||||
K01A2.8d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.8d.1:c.93-350T>C | |||||||
Intron_number | 1/4 | |||||||
K01A2.4a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K01A2.4a.2:c.*95+1249A>G | |||||||
Intron_number | 12/12 | |||||||
Method | WGS_Flibotte |