WormBase Tree Display for Variation: WBVar01701719
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WBVar01701719 | Name | Public_name | WBVar01701719 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00399041 | |||||||
Y55D5A.5f.1:c.3016-271A>C | ||||||||
Y55D5A.5a.1:c.5446-271A>C | ||||||||
Y55D5A.5e.1:c.5218-271A>C | ||||||||
Y55D5A.5c.1:c.5692-271A>C | ||||||||
Y55D5A.5g.1:c.1924-271A>C | ||||||||
Y55D5A.5d.1:c.5305-271A>C | ||||||||
HGVSg | CHROMOSOME_III:g.2996285T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
Flanking_sequences | TGCTTTTAAAACAATTTTTCATGGAAAATT | GAATTTTCTGGAGAATTTTAATGGAGTTTT | ||||||
Mapping_target | Y55D5A | |||||||
Source_location | 225 | CHROMOSOME_III | 2996277 | 2996277 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000898 | ||||||
Transcript | Y55D5A.5g.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5g.1:c.1924-271A>C | |||||||
Intron_number | 3/3 | |||||||
Y55D5A.5e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5e.1:c.5218-271A>C | |||||||
Intron_number | 14/14 | |||||||
Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5f.1:c.3016-271A>C | |||||||
Intron_number | 7/7 | |||||||
Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5a.1:c.5446-271A>C | |||||||
Intron_number | 17/18 | |||||||
Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5c.1:c.5692-271A>C | |||||||
Intron_number | 19/20 | |||||||
Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5d.1:c.5305-271A>C | |||||||
Intron_number | 15/15 | |||||||
Method | WGS_Flibotte |