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WormBase Tree Display for Variation: WBVar01698180

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Name Class

WBVar01698180NamePublic_nameWBVar01698180
Other_namecewivar00394975
CE30624:p.Lys187=
C29F9.3a.1:c.612A>G
CE28896:p.Lys204=
C29F9.3c.1:c.561A>G
C29F9.3b.1:c.*478A>G
C29F9.3a.2:c.612A>G
HGVSgCHROMOSOME_III:g.126069A>G
Sequence_detailsSMapS_parentSequenceC29F9
Flanking_sequencesAATACTTGAACAATGTCATGACAAGTTCAAGAGTTCCTGAATAACGACGCTCGTGTTCCT
Mapping_targetC29F9
Source_location225CHROMOSOME_III126068126068From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016218
TranscriptC29F9.3b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScC29F9.3b.1:c.*478A>G
cDNA_position754
Exon_number6/6
C29F9.3a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC29F9.3a.1:c.612A>G
HGVSpCE28896:p.Lys204=
cDNA_position639
CDS_position612
Protein_position204
Exon_number5/9
Codon_changeaaA/aaG
Amino_acid_changeK
C29F9.3c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC29F9.3c.1:c.561A>G
HGVSpCE30624:p.Lys187=
cDNA_position575
CDS_position561
Protein_position187
Exon_number6/8
Codon_changeaaA/aaG
Amino_acid_changeK
C29F9.3a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC29F9.3a.2:c.612A>G
HGVSpCE28896:p.Lys204=
cDNA_position626
CDS_position612
Protein_position204
Exon_number5/9
Codon_changeaaA/aaG
Amino_acid_changeK
MethodWGS_Flibotte