WormBase Tree Display for Variation: WBVar01698180
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WBVar01698180 | Name | Public_name | WBVar01698180 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00394975 | |||||||
CE30624:p.Lys187= | ||||||||
C29F9.3a.1:c.612A>G | ||||||||
CE28896:p.Lys204= | ||||||||
C29F9.3c.1:c.561A>G | ||||||||
C29F9.3b.1:c.*478A>G | ||||||||
C29F9.3a.2:c.612A>G | ||||||||
HGVSg | CHROMOSOME_III:g.126069A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | C29F9 | ||||
Flanking_sequences | AATACTTGAACAATGTCATGACAAGTTCAA | GAGTTCCTGAATAACGACGCTCGTGTTCCT | ||||||
Mapping_target | C29F9 | |||||||
Source_location | 225 | CHROMOSOME_III | 126068 | 126068 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016218 | ||||||
Transcript | C29F9.3b.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C29F9.3b.1:c.*478A>G | |||||||
cDNA_position | 754 | |||||||
Exon_number | 6/6 | |||||||
C29F9.3a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.3a.1:c.612A>G | |||||||
HGVSp | CE28896:p.Lys204= | |||||||
cDNA_position | 639 | |||||||
CDS_position | 612 | |||||||
Protein_position | 204 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | aaA/aaG | |||||||
Amino_acid_change | K | |||||||
C29F9.3c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.3c.1:c.561A>G | |||||||
HGVSp | CE30624:p.Lys187= | |||||||
cDNA_position | 575 | |||||||
CDS_position | 561 | |||||||
Protein_position | 187 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | aaA/aaG | |||||||
Amino_acid_change | K | |||||||
C29F9.3a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.3a.2:c.612A>G | |||||||
HGVSp | CE28896:p.Lys204= | |||||||
cDNA_position | 626 | |||||||
CDS_position | 612 | |||||||
Protein_position | 204 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | aaA/aaG | |||||||
Amino_acid_change | K | |||||||
Method | WGS_Flibotte |