WormBase Tree Display for Variation: WBVar01698171
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WBVar01698171 | Name | Public_name | WBVar01698171 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00394966 | |||||||
C29F9.3a.2:c.469A>C | ||||||||
CE28896:p.Arg157= | ||||||||
C29F9.3c.1:c.418A>C | ||||||||
CE30624:p.Arg140= | ||||||||
C29F9.3a.1:c.469A>C | ||||||||
C29F9.3b.1:c.*335A>C | ||||||||
HGVSg | CHROMOSOME_III:g.125880A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C29F9 | ||||
Flanking_sequences | CAAACCATTTTATACTGGACCAATGCGATT | GGACAAATATGTCGATCATTGGAGCTATTG | ||||||
Mapping_target | C29F9 | |||||||
Source_location | 225 | CHROMOSOME_III | 125879 | 125879 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016218 | ||||||
Transcript | C29F9.3b.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C29F9.3b.1:c.*335A>C | |||||||
cDNA_position | 611 | |||||||
Exon_number | 5/6 | |||||||
C29F9.3a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.3a.1:c.469A>C | |||||||
HGVSp | CE28896:p.Arg157= | |||||||
cDNA_position | 496 | |||||||
CDS_position | 469 | |||||||
Protein_position | 157 | |||||||
Exon_number | 4/9 | |||||||
Codon_change | Agg/Cgg | |||||||
Amino_acid_change | R | |||||||
C29F9.3c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.3c.1:c.418A>C | |||||||
HGVSp | CE30624:p.Arg140= | |||||||
cDNA_position | 432 | |||||||
CDS_position | 418 | |||||||
Protein_position | 140 | |||||||
Exon_number | 5/8 | |||||||
Codon_change | Agg/Cgg | |||||||
Amino_acid_change | R | |||||||
C29F9.3a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.3a.2:c.469A>C | |||||||
HGVSp | CE28896:p.Arg157= | |||||||
cDNA_position | 483 | |||||||
CDS_position | 469 | |||||||
Protein_position | 157 | |||||||
Exon_number | 4/9 | |||||||
Codon_change | Agg/Cgg | |||||||
Amino_acid_change | R | |||||||
Method | WGS_Flibotte |