WormBase Tree Display for Variation: WBVar01686747
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WBVar01686747 | Name | Public_name | WBVar01686747 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00378598 | |||||||
Y55D5A.5d.1:c.3312-532A>C | ||||||||
Y55D5A.5a.1:c.3453-532A>C | ||||||||
Y55D5A.5e.1:c.3225-532A>C | ||||||||
Y55D5A.5f.1:c.1023-532A>C | ||||||||
Y55D5A.5c.1:c.3699-532A>C | ||||||||
HGVSg | CHROMOSOME_III:g.3001914T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
Flanking_sequences | AAAAATGCAAAAACATGTAAAATCGAAAAA | TTTAAAGTGTTCACTGAAAAACACTGCAAT | ||||||
Mapping_target | Y55D5A | |||||||
Source_location | 225 | CHROMOSOME_III | 3001906 | 3001906 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000898 | ||||||
Transcript | Y55D5A.5e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5e.1:c.3225-532A>C | |||||||
Intron_number | 11/14 | |||||||
Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5f.1:c.1023-532A>C | |||||||
Intron_number | 4/7 | |||||||
Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5a.1:c.3453-532A>C | |||||||
Intron_number | 14/18 | |||||||
Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5c.1:c.3699-532A>C | |||||||
Intron_number | 16/20 | |||||||
Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5d.1:c.3312-532A>C | |||||||
Intron_number | 12/15 | |||||||
Method | WGS_Flibotte |