WormBase Tree Display for Variation: WBVar01643657
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| WBVar01643657 | Name | Public_name | WBVar01643657 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00329576 | |||||||
| Y55D5A.5e.1:c.3225-385C>T | ||||||||
| Y55D5A.5c.1:c.3699-385C>T | ||||||||
| Y55D5A.5f.1:c.1023-385C>T | ||||||||
| Y55D5A.5d.1:c.3312-385C>T | ||||||||
| Y55D5A.5a.1:c.3453-385C>T | ||||||||
| HGVSg | CHROMOSOME_III:g.3001767G>A | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
| Flanking_sequences | TAATCGAAAAAAATTTTCAAAATATTTAGAATTTTTTGAAATTGCTATAAATTTAAAAAATTCACGAAAAATTAAAATCTTAGATTTTCGCAAATTTTCAGCTTTAAATT | TCGATTTTGCCAACTTTTTCAGAGAAAGTG | ||||||
| Mapping_target | Y55D5A | |||||||
| Source_location | 225 | CHROMOSOME_III | 3001759 | 3001759 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Substitution | G | A | |||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00000898 | ||||||
| Transcript | Y55D5A.5e.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5e.1:c.3225-385C>T | |||||||
| Intron_number | 11/14 | |||||||
| Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5f.1:c.1023-385C>T | |||||||
| Intron_number | 4/7 | |||||||
| Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5a.1:c.3453-385C>T | |||||||
| Intron_number | 14/18 | |||||||
| Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5c.1:c.3699-385C>T | |||||||
| Intron_number | 16/20 | |||||||
| Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5d.1:c.3312-385C>T | |||||||
| Intron_number | 12/15 | |||||||
| Method | WGS_Flibotte |
