WormBase Tree Display for Variation: WBVar01643656
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| WBVar01643656 | Name | Public_name | WBVar01643656 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00329575 | |||||||
| Y55D5A.5a.1:c.4983+286G>A | ||||||||
| Y55D5A.5c.1:c.5229+286G>A | ||||||||
| Y55D5A.5f.1:c.2553+286G>A | ||||||||
| Y55D5A.5e.1:c.4755+286G>A | ||||||||
| Y55D5A.5d.1:c.4842+286G>A | ||||||||
| Y55D5A.5g.1:c.1461+286G>A | ||||||||
| HGVSg | CHROMOSOME_III:g.2999566C>T | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
| Flanking_sequences | TGACGAAAATTTTCATCTTTGGCAAACTGC | GGTTTGCCAATTTGCCGGAATTTTTCAATT | ||||||
| Mapping_target | Y55D5A | |||||||
| Source_location | 225 | CHROMOSOME_III | 2999558 | 2999558 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Substitution | C | T | |||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00000898 | ||||||
| Transcript | Y55D5A.5g.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5g.1:c.1461+286G>A | |||||||
| Intron_number | 1/3 | |||||||
| Y55D5A.5e.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5e.1:c.4755+286G>A | |||||||
| Intron_number | 12/14 | |||||||
| Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5f.1:c.2553+286G>A | |||||||
| Intron_number | 5/7 | |||||||
| Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5a.1:c.4983+286G>A | |||||||
| Intron_number | 15/18 | |||||||
| Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5c.1:c.5229+286G>A | |||||||
| Intron_number | 17/20 | |||||||
| Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5d.1:c.4842+286G>A | |||||||
| Intron_number | 13/15 | |||||||
| Method | WGS_Flibotte |
