WormBase Tree Display for Variation: WBVar01631650
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WBVar01631650 | Name | Public_name | WBVar01631650 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00313277 | |||||||
F36G9.12.1:c.1168T>C | ||||||||
CE42860:p.Leu390= | ||||||||
HGVSg | CHROMOSOME_V:g.15980258T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F36G9 | ||||
Flanking_sequences | TATGTTCAAGGACCAACTGCCGCTGCAGGC | TGAGTAAGTTCATTCTTTTGAATAAAATGT | ||||||
Mapping_target | F36G9 | |||||||
Source_location | 225 | CHROMOSOME_V | 15980238 | 15980238 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009488 | ||||||
Transcript | F36G9.12.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F36G9.12.1:c.1168T>C | |||||||
HGVSp | CE42860:p.Leu390= | |||||||
cDNA_position | 1179 | |||||||
CDS_position | 1168 | |||||||
Protein_position | 390 | |||||||
Exon_number | 4/11 | |||||||
Codon_change | Ttg/Ctg | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |