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WormBase Tree Display for Variation: WBVar01628042

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Name Class

WBVar01628042NamePublic_nameWBVar01628042
Other_namecewivar00309333
Y55D5A.5d.1:c.2348-299T>A
Y55D5A.5c.1:c.2489-299T>A
Y55D5A.5f.1:c.59-299T>A
Y55D5A.5a.1:c.2489-299T>A
Y55D5A.5e.1:c.2261-299T>A
HGVSgCHROMOSOME_III:g.3009191A>T
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesTTCATAGGGCAAGCAGCGGTGAAAGTGGGCAATGTAAAATGATGGATTACGGGAATACAAACCTAAACTTTTTCTGAAACATGATACATATGCTGCTCTG
Mapping_targetY55D5A
Source_location225CHROMOSOME_III30091833009183From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.2261-299T>A
Intron_number8/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.59-299T>A
Intron_number1/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.2489-299T>A
Intron_number11/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.2489-299T>A
Intron_number12/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.2348-299T>A
Intron_number9/15
MethodWGS_Flibotte