WormBase Tree Display for Variation: WBVar01628042
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WBVar01628042 | Name | Public_name | WBVar01628042 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00309333 | |||||||
Y55D5A.5d.1:c.2348-299T>A | ||||||||
Y55D5A.5c.1:c.2489-299T>A | ||||||||
Y55D5A.5f.1:c.59-299T>A | ||||||||
Y55D5A.5a.1:c.2489-299T>A | ||||||||
Y55D5A.5e.1:c.2261-299T>A | ||||||||
HGVSg | CHROMOSOME_III:g.3009191A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
Flanking_sequences | TTCATAGGGCAAGCAGCGGTGAAAGTGGGCAATGTAAAATGATGGATTACGGGAATACAA | ACCTAAACTTTTTCTGAAACATGATACATATGCTGCTCTG | ||||||
Mapping_target | Y55D5A | |||||||
Source_location | 225 | CHROMOSOME_III | 3009183 | 3009183 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000898 | ||||||
Transcript | Y55D5A.5e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5e.1:c.2261-299T>A | |||||||
Intron_number | 8/14 | |||||||
Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5f.1:c.59-299T>A | |||||||
Intron_number | 1/7 | |||||||
Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5a.1:c.2489-299T>A | |||||||
Intron_number | 11/18 | |||||||
Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5c.1:c.2489-299T>A | |||||||
Intron_number | 12/20 | |||||||
Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5d.1:c.2348-299T>A | |||||||
Intron_number | 9/15 | |||||||
Method | WGS_Flibotte |